Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 FP325330.2-201ENST00000624219 5630 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 AP002414.2-201ENST00000591780 3365 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 AC131212.3-201ENST00000624087 4219 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 AC006001.1-201ENST00000325130 474 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 AC022210.1-201ENST00000449856 793 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 AC078819.1-201ENST00000547454 765 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 AC012085.1-201ENST00000548270 765 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.78□□□□□ -0.36
TNFSF4P23510 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.78□□□□□ -0.36
TNFSF4P23510 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 COX11-210ENST00000639671 696 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TNFSF4P23510 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TNFSF4P23510 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 ACE3P-201ENST00000423435 1973 ntBASIC12.78□□□□□ -0.36
TNFSF4P23510 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TNFSF4P23510 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
TNFSF4P23510 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.77□□□□□ -0.36
TNFSF4P23510 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TNFSF4P23510 AL122018.1-201ENST00000446607 2310 ntBASIC12.77□□□□□ -0.36
TNFSF4P23510 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TNFSF4P23510 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.77□□□□□ -0.37
TNFSF4P23510 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AL590640.2-201ENST00000457038 527 ntBASIC12.77□□□□□ -0.37
TNFSF4P23510 MESTP3-201ENST00000503460 968 ntBASIC12.77□□□□□ -0.37
TNFSF4P23510 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.77□□□□□ -0.37
TNFSF4P23510 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.77□□□□□ -0.37
TNFSF4P23510 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TNFSF4P23510 AC138466.3-201ENST00000619983 221 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms