Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC018665.1-201ENST00000622927 1362 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 CU639417.3-201ENST00000624240 1404 ntBASIC17.21■□□□□ 0.35
ATP2B1P20020 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2B1P20020 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ATP2B1P20020 COX5BP8-201ENST00000416911 349 ntBASIC17.21■□□□□ 0.35
ATP2B1P20020 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 AC012441.1-201ENST00000446669 685 ntBASIC17.21■□□□□ 0.35
ATP2B1P20020 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2B1P20020 GIMAP3P-201ENST00000495150 836 ntBASIC17.21■□□□□ 0.35
ATP2B1P20020 AC068587.3-201ENST00000526613 355 ntBASIC17.21■□□□□ 0.35
ATP2B1P20020 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2B1P20020 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP2B1P20020 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ATP2B1P20020 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2B1P20020 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2B1P20020 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2B1P20020 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2B1P20020 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2B1P20020 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2B1P20020 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2B1P20020 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2B1P20020 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 BCRP2-202ENST00000447763 634 ntBASIC17.2■□□□□ 0.34
ATP2B1P20020 AC106760.1-201ENST00000508690 800 ntBASIC17.2■□□□□ 0.34
ATP2B1P20020 BCRP6-201ENST00000510112 632 ntBASIC17.2■□□□□ 0.34
ATP2B1P20020 BCRP7-201ENST00000511549 544 ntBASIC17.2■□□□□ 0.34
ATP2B1P20020 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ATP2B1P20020 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2B1P20020 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ATP2B1P20020 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.2■□□□□ 0.34
ATP2B1P20020 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2B1P20020 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2B1P20020 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2B1P20020 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2B1P20020 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2B1P20020 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP2B1P20020 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2B1P20020 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2B1P20020 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 AP001267.2-201ENST00000532619 2086 ntBASIC17.19■□□□□ 0.34
ATP2B1P20020 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2B1P20020 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2B1P20020 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2B1P20020 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
ATP2B1P20020 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ATP2B1P20020 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ATP2B1P20020 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2B1P20020 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
ATP2B1P20020 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2B1P20020 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms