Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC097065.1-201ENST00000425737 517 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC095040.1-201ENST00000513286 675 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.47■□□□□ 0.23
COL11A1P12107 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC005586.2-201ENST00000563946 837 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.47■□□□□ 0.23
COL11A1P12107 AC105137.3-201ENST00000617588 984 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL11A1P12107 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 AC215219.1-201ENST00000400706 1817 ntBASIC16.46■□□□□ 0.23
COL11A1P12107 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
COL11A1P12107 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.46■□□□□ 0.23
COL11A1P12107 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.46■□□□□ 0.23
COL11A1P12107 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.46■□□□□ 0.23
COL11A1P12107 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.46■□□□□ 0.23
COL11A1P12107 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL11A1P12107 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL11A1P12107 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL11A1P12107 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
COL11A1P12107 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL11A1P12107 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL11A1P12107 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL11A1P12107 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 AL354861.1-201ENST00000445213 355 ntBASIC16.45■□□□□ 0.22
COL11A1P12107 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.45■□□□□ 0.22
COL11A1P12107 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 HLA-C-210ENST00000640219 976 ntBASIC16.45■□□□□ 0.22
COL11A1P12107 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 TEKT4P2-202ENST00000559466 1312 ntBASIC16.45■□□□□ 0.22
COL11A1P12107 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC092638.2-201ENST00000441105 947 ntBASIC16.45■□□□□ 0.22
COL11A1P12107 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC005740.1-201ENST00000515639 522 ntBASIC16.45■□□□□ 0.22
COL11A1P12107 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.45■□□□□ 0.22
COL11A1P12107 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
COL11A1P12107 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL11A1P12107 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL11A1P12107 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.44■□□□□ 0.22
COL11A1P12107 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL11A1P12107 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms