Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SP9P0CG40 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.31□□□□□ -0.12
SP9P0CG40 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SP9P0CG40 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SP9P0CG40 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 SSR4P1-203ENST00000599569 2260 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.3□□□□□ -0.12
SP9P0CG40 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 KRT18P4-201ENST00000422599 1288 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 GRPEL2P1-201ENST00000453145 339 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.3□□□□□ -0.12
SP9P0CG40 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 AC140658.4-201ENST00000561990 352 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 AC145285.5-201ENST00000562217 361 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 AL359091.4-201ENST00000610052 409 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SP9P0CG40 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 AC010491.1-201ENST00000563101 2797 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.3□□□□□ -0.12
SP9P0CG40 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.3□□□□□ -0.12
SP9P0CG40 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SP9P0CG40 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.3□□□□□ -0.12
SP9P0CG40 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SP9P0CG40 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 OR7E115P-201ENST00000382617 1024 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.29□□□□□ -0.12
SP9P0CG40 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 BCRP4-201ENST00000506079 804 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 KRT18P37-201ENST00000520711 1282 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 AC023968.2-201ENST00000560593 1049 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.29□□□□□ -0.12
SP9P0CG40 FBXO36P1-201ENST00000579006 471 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 AP005264.5-201ENST00000590066 467 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SP9P0CG40 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 AC110057.1-201ENST00000636031 898 ntBASIC14.29□□□□□ -0.12
SP9P0CG40 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SP9P0CG40 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SP9P0CG40 FKBP4P8-201ENST00000610931 1369 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms