Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 RN7SL832P-201ENST00000607781 1756 ntBASIC14.89□□□□□ -0.03
MMP2P08253 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
MMP2P08253 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.89□□□□□ -0.03
MMP2P08253 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 YBX1P6-201ENST00000442962 1002 ntBASIC14.89□□□□□ -0.03
MMP2P08253 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.89□□□□□ -0.03
MMP2P08253 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP2P08253 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 AC009542.2-202ENST00000619004 1067 ntBASIC14.89□□□□□ -0.03
MMP2P08253 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP2P08253 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 AC012617.1-204ENST00000586340 2305 ntBASIC14.89□□□□□ -0.03
MMP2P08253 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 PKD1P5-201ENST00000532415 10291 ntBASIC14.89□□□□□ -0.03
MMP2P08253 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
MMP2P08253 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.89□□□□□ -0.03
MMP2P08253 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.88□□□□□ -0.03
MMP2P08253 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 AC068418.2-201ENST00000577309 3703 ntBASIC14.88□□□□□ -0.03
MMP2P08253 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.88□□□□□ -0.03
MMP2P08253 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.88□□□□□ -0.03
MMP2P08253 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.88□□□□□ -0.03
MMP2P08253 RNA5SP412-201ENST00000516234 123 ntBASIC14.88□□□□□ -0.03
MMP2P08253 AC009955.4-201ENST00000597192 544 ntBASIC14.88□□□□□ -0.03
MMP2P08253 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 AC011498.7-201ENST00000624986 2027 ntBASIC14.88□□□□□ -0.03
MMP2P08253 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP2P08253 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP2P08253 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP2P08253 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP2P08253 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 NORAD-201ENST00000565493 5339 ntBASIC14.87□□□□□ -0.03
MMP2P08253 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP2P08253 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MMP2P08253 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP2P08253 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms