Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PDGFBP01127 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 ALG1L3P-201ENST00000503331 765 ntBASIC14.68□□□□□ -0.06
PDGFBP01127 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 AC018846.1-201ENST00000568231 183 ntBASIC14.68□□□□□ -0.06
PDGFBP01127 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.68□□□□□ -0.06
PDGFBP01127 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.68□□□□□ -0.06
PDGFBP01127 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 PRAL-201ENST00000624952 3286 ntBASIC14.68□□□□□ -0.06
PDGFBP01127 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
PDGFBP01127 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PDGFBP01127 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
PDGFBP01127 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDGFBP01127 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 AF274858.1-201ENST00000406288 372 ntBASIC14.67□□□□□ -0.06
PDGFBP01127 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFBP01127 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFBP01127 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFBP01127 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFBP01127 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.67□□□□□ -0.06
PDGFBP01127 AC090136.2-201ENST00000517809 420 ntBASIC14.67□□□□□ -0.06
PDGFBP01127 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.67□□□□□ -0.06
PDGFBP01127 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 AC013553.1-201ENST00000560906 267 ntBASIC14.67□□□□□ -0.06
PDGFBP01127 RN7SL665P-201ENST00000578793 300 ntBASIC14.67□□□□□ -0.06
PDGFBP01127 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFBP01127 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDGFBP01127 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms