Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN9O14815 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN9O14815 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN9O14815 RNA5SP486-201ENST00000515961 83 ntBASIC15.79■□□□□ 0.12
CAPN9O14815 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN9O14815 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN9O14815 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN9O14815 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN9O14815 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN9O14815 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPN9O14815 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 CICP14-201ENST00000629111 2732 ntBASIC15.79■□□□□ 0.12
CAPN9O14815 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN9O14815 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN9O14815 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CAPN9O14815 LINC00552-201ENST00000625151 2579 ntBASIC15.79■□□□□ 0.12
CAPN9O14815 PDIA3P1-201ENST00000471856 1510 ntBASIC15.78■□□□□ 0.12
CAPN9O14815 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CAPN9O14815 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN9O14815 KLF2P4-201ENST00000451959 1225 ntBASIC15.78■□□□□ 0.12
CAPN9O14815 ACA64.2-201ENST00000459014 129 ntBASIC15.78■□□□□ 0.12
CAPN9O14815 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN9O14815 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CAPN9O14815 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN9O14815 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN9O14815 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN9O14815 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 AC023090.2-201ENST00000625182 2110 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CAPN9O14815 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN9O14815 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CAPN9O14815 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN9O14815 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CAPN9O14815 FAM197Y7-201ENST00000432892 766 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 CTBP2P5-201ENST00000454986 1264 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.77■□□□□ 0.12
CAPN9O14815 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN9O14815 KRT90P-201ENST00000549264 1064 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN9O14815 ECM1P1-201ENST00000604092 1279 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 AC138951.2-201ENST00000623455 1161 ntBASIC15.77■□□□□ 0.12
CAPN9O14815 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.77■□□□□ 0.11
CAPN9O14815 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN9O14815 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN9O14815 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.77■□□□□ 0.11
CAPN9O14815 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN9O14815 AC005840.4-201ENST00000541242 2494 ntBASIC15.77■□□□□ 0.11
CAPN9O14815 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN9O14815 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN9O14815 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.77■□□□□ 0.11
CAPN9O14815 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
CAPN9O14815 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms