Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 AP006294.1-201ENST00000415407 339 ntBASIC14.61□□□□□ -0.07
CDC7O00311 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.61□□□□□ -0.07
CDC7O00311 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC7O00311 AC106760.1-201ENST00000508690 800 ntBASIC14.61□□□□□ -0.07
CDC7O00311 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 ENPP7P14-201ENST00000621765 1040 ntBASIC14.61□□□□□ -0.07
CDC7O00311 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
CDC7O00311 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 MRPL37P1-201ENST00000592451 1337 ntBASIC14.61□□□□□ -0.07
CDC7O00311 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC7O00311 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC7O00311 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC7O00311 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC7O00311 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC7O00311 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 MESTP3-201ENST00000503460 968 ntBASIC14.6□□□□□ -0.07
CDC7O00311 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC7O00311 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC7O00311 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.6□□□□□ -0.07
CDC7O00311 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC7O00311 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 AC138696.2-201ENST00000607376 223 ntBASIC14.6□□□□□ -0.07
CDC7O00311 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC7O00311 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC7O00311 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CDC7O00311 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC7O00311 AL365209.1-201ENST00000624418 6473 ntBASIC14.6□□□□□ -0.07
CDC7O00311 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDC7O00311 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC7O00311 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.59□□□□□ -0.07
CDC7O00311 RN7SL837P-201ENST00000463010 287 ntBASIC14.59□□□□□ -0.07
CDC7O00311 AL391280.1-201ENST00000506969 1062 ntBASIC14.59□□□□□ -0.07
CDC7O00311 GCOM2-201ENST00000509133 1104 ntBASIC14.59□□□□□ -0.07
CDC7O00311 AP001889.1-201ENST00000525414 633 ntBASIC14.59□□□□□ -0.07
CDC7O00311 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC7O00311 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.59□□□□□ -0.07
CDC7O00311 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 AC138466.3-201ENST00000619983 221 ntBASIC14.59□□□□□ -0.07
CDC7O00311 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.59□□□□□ -0.07
CDC7O00311 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC7O00311 AC025048.6-201ENST00000634326 1161 ntBASIC14.59□□□□□ -0.07
CDC7O00311 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms