Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 TMEM14DP-201ENST00000422205 345 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC106886.1-201ENST00000568660 600 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC132938.2-201ENST00000579188 680 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AC104506.1-201ENST00000609247 429 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AL591163.1-201ENST00000641757 987 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AL354989.2-201ENST00000435838 1540 ntBASIC13.11□□□□□ -0.31
NPIPB4C9JG80 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPB4C9JG80 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 BOLA2P3-201ENST00000404566 256 ntBASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AL358472.3-201ENST00000608147 415 ntBASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RHOXF1P1-202ENST00000635473 501 ntBASIC13.1□□□□□ -0.31
NPIPB4C9JG80 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPB4C9JG80 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPB4C9JG80 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms