Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 KRT8P14-201ENST00000414254 1442 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AL139094.1-201ENST00000405549 1188 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 HLA-K-203ENST00000430151 1046 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 WASH4P-201ENST00000564273 1246 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AC027307.3-201ENST00000594262 1100 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 CU634019.7-201ENST00000624153 1185 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 FP236241.2-201ENST00000624906 1185 ntBASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DRB4X5D2U9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AL157414.3-201ENST00000624276 1954 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AC092135.3-201ENST00000624151 1846 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AC114812.1-204ENST00000449669 728 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AP001063.1-201ENST00000568332 529 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 CTBP2P3-201ENST00000585629 1255 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms