Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC022217.1-201ENST00000521069 738 ntBASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 RPL18P13-201ENST00000478088 569 ntBASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AC023090.2-201ENST00000625182 2110 ntBASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AL162727.3-201ENST00000635661 2787 ntBASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTDP1Q9Y5B0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 RN7SL774P-201ENST00000577467 290 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AC132192.2-201ENST00000596206 1147 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 AC068587.8-201ENST00000641239 219 ntBASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTDP1Q9Y5B0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms