Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC012508.2-201ENST00000567613 1472 ntBASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC006001.1-201ENST00000325130 474 ntBASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC007969.1-201ENST00000433675 447 ntBASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 MIR4741-201ENST00000579822 90 ntBASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FNDC3AQ9Y2H6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 MROH4P-201ENST00000431302 1578 ntBASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC103702.1-201ENST00000548801 2630 ntBASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 RNU1-114P-201ENST00000365297 166 ntBASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC244517.3-201ENST00000616254 1235 ntBASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC131212.3-201ENST00000624087 4219 ntBASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms