Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 AC006987.1-201ENST00000413610 527 ntBASIC18.58■□□□□ 0.56
SCN11AQ9UI33 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 HERC2P11-201ENST00000562845 725 ntBASIC18.58■□□□□ 0.56
SCN11AQ9UI33 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 AC100756.2-201ENST00000569537 736 ntBASIC18.58■□□□□ 0.56
SCN11AQ9UI33 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SCN11AQ9UI33 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 KRT8P43-201ENST00000406052 1458 ntBASIC18.57■□□□□ 0.56
SCN11AQ9UI33 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 AC019109.1-201ENST00000401725 1874 ntBASIC18.57■□□□□ 0.56
SCN11AQ9UI33 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 RPL3P2-204ENST00000413027 1203 ntBASIC18.57■□□□□ 0.56
SCN11AQ9UI33 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 RN7SL470P-201ENST00000583069 259 ntBASIC18.57■□□□□ 0.56
SCN11AQ9UI33 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN11AQ9UI33 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 MTHFR-210ENST00000641407 2387 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AC090505.1-201ENST00000430515 1834 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 CICP14-201ENST00000629111 2732 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AC068867.1-201ENST00000559855 150 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AC006372.4-201ENST00000624122 1543 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AC011498.7-201ENST00000624986 2027 ntBASIC18.56■□□□□ 0.56
SCN11AQ9UI33 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN11AQ9UI33 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 RN7SL455P-201ENST00000580629 282 ntBASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AC140113.1-201ENST00000603467 169 ntBASIC18.55■□□□□ 0.56
SCN11AQ9UI33 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AL021707.6-201ENST00000609212 491 ntBASIC18.55■□□□□ 0.56
SCN11AQ9UI33 AC127024.7-201ENST00000625101 200 ntBASIC18.55■□□□□ 0.56
SCN11AQ9UI33 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SCN11AQ9UI33 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.55■□□□□ 0.56
SCN11AQ9UI33 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms