Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 RPL5P21-201ENST00000404620 815 ntBASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 AC138466.3-201ENST00000619983 221 ntBASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 AC067930.6-201ENST00000623257 4947 ntBASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC6Q9UBN7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HDAC6Q9UBN7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HDAC6Q9UBN7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HDAC6Q9UBN7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AC104457.1-201ENST00000401024 814 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 EIF4HP1-201ENST00000453115 687 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 SERPINA13P-202ENST00000478994 924 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 DUX4L47-201ENST00000566374 394 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 NDUFV2P1-201ENST00000596415 907 ntBASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDAC6Q9UBN7 AC005840.4-201ENST00000541242 2494 ntBASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AL662890.1-201ENST00000396818 632 ntBASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AC092506.1-202ENST00000401022 528 ntBASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AC016700.1-201ENST00000429424 312 ntBASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FTLP10-202ENST00000505798 471 ntBASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC6Q9UBN7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms