Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AP000593.2-201ENST00000542775 1433 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC005089.1-201ENST00000619486 2241 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AC020910.5-201ENST00000623668 1865 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 ANKRD19P-201ENST00000338192 862 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 FAM8A4P-201ENST00000435433 1213 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AC007274.1-201ENST00000439805 662 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 KRT223P-202ENST00000449164 1292 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 KLF2P4-201ENST00000451959 1225 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AP005482.1-201ENST00000563722 1273 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 MIR4259-201ENST00000584466 101 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AC138951.2-201ENST00000623455 1161 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 RHOXF1P1-202ENST00000635473 501 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 COX11-210ENST00000639671 696 ntBASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCMF1Q9P0J7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AC097376.2-205ENST00000610159 5334 ntBASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AC131206.1-201ENST00000538078 1211 ntBASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.12□□□□□ -0.15
KCMF1Q9P0J7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms