Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01230-201ENST00000625222 3017 ntBASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 HLA-V-201ENST00000429037 534 ntBASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 AL355994.2-201ENST00000447882 704 ntBASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 GPR53P-205ENST00000457298 1084 ntBASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BLOC1S4Q9NUP1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BLOC1S4Q9NUP1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BLOC1S4Q9NUP1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BLOC1S4Q9NUP1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
BLOC1S4Q9NUP1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
BLOC1S4Q9NUP1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AL023775.1-201ENST00000454907 1746 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 HOMER2P2-201ENST00000451621 847 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AC100850.1-201ENST00000506768 649 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AC023310.1-201ENST00000554836 735 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AC008825.2-201ENST00000603374 718 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 SHC1P1-201ENST00000425230 1745 ntBASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BLOC1S4Q9NUP1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms