Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 RPS2P32-201ENST00000439199 892 ntBASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AC140912.1-201ENST00000577171 1054 ntBASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 TCAM1P-207ENST00000485295 1537 ntBASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AL356585.2-201ENST00000625078 2396 ntBASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC126335.2-201ENST00000623362 4637 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AL360270.3-201ENST00000609118 1348 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AL353779.1-201ENST00000434793 351 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 BANF1P1-201ENST00000553684 263 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC105021.1-202ENST00000570572 669 ntBASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCM2LQ9NUG4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms