Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CICP17-201ENST00000418553 2377 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CRB3P1-201ENST00000449338 276 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 RN7SL837P-201ENST00000463010 287 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 FTLP10-202ENST00000505798 471 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 AC068587.3-201ENST00000526613 355 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SORD2P-201ENST00000558556 1069 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 RN7SL48P-201ENST00000579283 293 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 TCAM1P-207ENST00000485295 1537 ntBASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RSPO3Q9BXY4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.58□□□□□ -0.23
RSPO3Q9BXY4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 AC092933.1-201ENST00000393644 945 ntBASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 AL590640.2-201ENST00000457038 527 ntBASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 TDH-203ENST00000531764 1110 ntBASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 AC025279.2-201ENST00000569730 653 ntBASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.58□□□□□ -0.24
RSPO3Q9BXY4 MIR4683-201ENST00000579659 81 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms