Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPAP1Q9BWH6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 CYP46A4P-201ENST00000414953 267 ntBASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AC016629.1-201ENST00000596579 586 ntBASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AC138696.2-201ENST00000607376 223 ntBASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPAP1Q9BWH6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RPAP1Q9BWH6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RPAP1Q9BWH6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RPAP1Q9BWH6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 AC041040.2-201ENST00000622926 2899 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 KRT8P29-201ENST00000420409 1371 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 AL138725.1-201ENST00000407347 1314 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 AC113367.3-201ENST00000508316 1912 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 MIR769-201ENST00000390225 118 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 RN7SKP175-201ENST00000408472 289 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 RN7SL769P-201ENST00000469386 295 ntBASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPAP1Q9BWH6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms