Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 KRT8P35-201ENST00000483942 1338 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AC023024.2-201ENST00000623561 1993 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 LRRC59-203ENST00000576448 1531 ntBASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 RPS2P32-201ENST00000439199 892 ntBASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCGF1Q9BSM1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.58□□□□□ -0.39
PCGF1Q9BSM1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
PCGF1Q9BSM1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
PCGF1Q9BSM1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.39
PCGF1Q9BSM1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PCGF1Q9BSM1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ANKRD19P-201ENST00000338192 862 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 RNU1-114P-201ENST00000365297 166 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC092933.1-201ENST00000393644 945 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 NUS1P3-201ENST00000423502 862 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms