Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VGLL1Q99990 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
VGLL1Q99990 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.36□□□□□ -0.59
VGLL1Q99990 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
VGLL1Q99990 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 CNN2P2-201ENST00000443536 909 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 CNN2P3-201ENST00000450201 906 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC069120.2-201ENST00000524091 540 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VGLL1Q99990 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AL136317.3-201ENST00000618497 906 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC134684.3-201ENST00000641758 218 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC099521.3-201ENST00000624251 2938 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.36□□□□□ -0.59
VGLL1Q99990 TCAF1P1-201ENST00000414990 2232 ntBASIC11.36□□□□□ -0.59
VGLL1Q99990 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VGLL1Q99990 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.36□□□□□ -0.59
VGLL1Q99990 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VGLL1Q99990 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AC087499.5-201ENST00000452760 1342 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms