Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 RPL13AP19-201ENST00000434320 584 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC6Q99741 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC6Q99741 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC6Q99741 IGHV3-37-201ENST00000518544 340 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 AP003398.1-201ENST00000531124 318 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 PHBP15-201ENST00000574228 665 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CDC6Q99741 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC6Q99741 MIR3188-201ENST00000583494 85 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 AC007881.3-201ENST00000608897 607 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 AC133540.1-201ENST00000620845 1019 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 AC092299.1-201ENST00000632679 757 ntBASIC14.33□□□□□ -0.12
CDC6Q99741 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDC6Q99741 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDC6Q99741 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC6Q99741 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDC6Q99741 AL583805.1-201ENST00000391389 531 ntBASIC14.32□□□□□ -0.12
CDC6Q99741 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.32□□□□□ -0.12
CDC6Q99741 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.32□□□□□ -0.12
CDC6Q99741 AL157407.1-201ENST00000435784 904 ntBASIC14.32□□□□□ -0.12
CDC6Q99741 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.32□□□□□ -0.12
CDC6Q99741 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.32□□□□□ -0.12
CDC6Q99741 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.32□□□□□ -0.12
CDC6Q99741 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 AC144522.1-201ENST00000625111 1658 ntBASIC14.32□□□□□ -0.12
CDC6Q99741 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC6Q99741 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDC6Q99741 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC6Q99741 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms