Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AL157414.3-201ENST00000624276 1954 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 RPSAP43-201ENST00000402237 625 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AL079307.3-201ENST00000556114 283 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AF228730.6-201ENST00000641497 218 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 AC084121.3-201ENST00000641716 218 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 DGCR9-201ENST00000609630 2415 ntBASIC12.13□□□□□ -0.47
RAB40CQ96S21 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RAB40CQ96S21 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB40CQ96S21 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 YBX1P5-201ENST00000509441 847 ntBASIC12.12□□□□□ -0.47
RAB40CQ96S21 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC026150.2-201ENST00000564693 1156 ntBASIC12.12□□□□□ -0.47
RAB40CQ96S21 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC105339.1-204ENST00000636249 355 ntBASIC12.12□□□□□ -0.47
RAB40CQ96S21 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms