Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
DDX1Q92499 AL356737.1-201ENST00000634391 234 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.81■□□□□ 0.12
DDX1Q92499 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 CNN2P8-201ENST00000421872 913 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 AC007551.1-201ENST00000457394 519 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 RNA5SP486-201ENST00000515961 83 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.8■□□□□ 0.12
DDX1Q92499 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 AC136759.1-202ENST00000530858 2194 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 AC090505.1-201ENST00000430515 1834 ntBASIC15.8■□□□□ 0.12
DDX1Q92499 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.8■□□□□ 0.12
DDX1Q92499 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
DDX1Q92499 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
DDX1Q92499 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 AC006504.5-208ENST00000588784 2401 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 AC117489.1-201ENST00000625169 3217 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 AL590440.2-201ENST00000641973 1595 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 LINC01230-201ENST00000625222 3017 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 TPM3P8-201ENST00000330554 643 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
DDX1Q92499 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.79■□□□□ 0.12
DDX1Q92499 FAM197Y7-201ENST00000432892 766 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.79■□□□□ 0.12
DDX1Q92499 AP001258.2-201ENST00000529891 490 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 AP000812.2-201ENST00000538934 718 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.79■□□□□ 0.12
DDX1Q92499 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
DDX1Q92499 AC139712.1-201ENST00000378256 1875 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 AC215219.1-201ENST00000400706 1817 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 AC012617.1-204ENST00000586340 2305 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 GRK6P1-201ENST00000400595 1711 ntBASIC15.79■□□□□ 0.12
DDX1Q92499 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
DDX1Q92499 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
DDX1Q92499 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 314.9 ms