Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AC011498.7-201ENST00000624986 2027 ntBASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 KHSRPP1-201ENST00000427983 1768 ntBASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CES1P1-201ENST00000421606 1704 ntBASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 UXT-AS1-201ENST00000590504 1525 ntBASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AL133215.2-201ENST00000609242 977 ntBASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AC026120.1-201ENST00000611536 926 ntBASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM4Q8WVI0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 PCDHB18P-202ENST00000526308 3197 ntBASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM4Q8WVI0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms