Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 MYADML-201ENST00000474610 2147 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AP000593.2-201ENST00000542775 1433 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AC152010.1-201ENST00000415779 2006 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 FTH1P14-201ENST00000482930 551 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 RNA5SP486-201ENST00000515961 83 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AP001002.3-201ENST00000623482 206 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AL161772.1-201ENST00000610494 4412 ntBASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH19Q8TAB3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 BOLA2P3-201ENST00000404566 256 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 RN7SKP175-201ENST00000408472 289 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 HLA-V-201ENST00000429037 534 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 FAM197Y7-201ENST00000432892 766 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 AC119751.2-201ENST00000504529 210 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 MIR4259-201ENST00000584466 101 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 AL022328.1-201ENST00000610050 478 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 BX088702.1-201ENST00000610784 235 ntBASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH19Q8TAB3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH19Q8TAB3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms