Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 AL035456.1-201ENST00000456064 1369 ntBASIC14.56□□□□□ -0.08
HIPK4Q8NE63 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.56□□□□□ -0.08
HIPK4Q8NE63 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 MIR574-201ENST00000385209 96 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AL627223.1-201ENST00000416693 442 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 FAM58DP-201ENST00000428076 619 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 TARDBPP1-201ENST00000442013 1203 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AC005829.1-201ENST00000570002 483 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 RN7SL828P-201ENST00000607615 303 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AC007967.4-201ENST00000614700 386 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 KRT8P12-202ENST00000472924 1397 ntBASIC14.55□□□□□ -0.08
HIPK4Q8NE63 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIPK4Q8NE63 AC016397.2-201ENST00000624848 1985 ntBASIC14.54□□□□□ -0.08
HIPK4Q8NE63 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AC022447.6-201ENST00000515522 438 ntBASIC14.54□□□□□ -0.08
HIPK4Q8NE63 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.54□□□□□ -0.08
HIPK4Q8NE63 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms