Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C9orf40Q8IXQ3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C9orf40Q8IXQ3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C9orf40Q8IXQ3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C9orf40Q8IXQ3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC139712.1-201ENST00000378256 1875 ntBASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC103988.2-201ENST00000561804 725 ntBASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC104982.3-201ENST00000581995 514 ntBASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC015688.4-201ENST00000580780 1647 ntBASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 AC006504.5-208ENST00000588784 2401 ntBASIC13.68□□□□□ -0.22
C9orf40Q8IXQ3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 PCDHA3-202ENST00000532566 4594 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC113367.3-201ENST00000508316 1912 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 PFN1P12-201ENST00000455938 534 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MIR4538-201ENST00000581377 78 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC027601.3-201ENST00000622907 509 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AL162426.1-201ENST00000624141 743 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC018735.1-201ENST00000437208 1502 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 INTS4P1-203ENST00000641008 3683 ntBASIC13.67□□□□□ -0.22
C9orf40Q8IXQ3 AC140479.7-201ENST00000636301 2332 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms