Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PIN1P1-201ENST00000412108 996 ntBASIC13.8□□□□□ -0.2
VRK2Q86Y07 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 AC190387.1-201ENST00000551683 408 ntBASIC13.8□□□□□ -0.2
VRK2Q86Y07 AC140912.1-201ENST00000577171 1054 ntBASIC13.8□□□□□ -0.2
VRK2Q86Y07 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 MSTO2P-201ENST00000314835 1709 ntBASIC13.8□□□□□ -0.2
VRK2Q86Y07 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK2Q86Y07 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK2Q86Y07 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC041040.2-201ENST00000622926 2899 ntBASIC13.79□□□□□ -0.2
VRK2Q86Y07 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC022137.2-201ENST00000503482 481 ntBASIC13.79□□□□□ -0.2
VRK2Q86Y07 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 MIR4745-201ENST00000577608 62 ntBASIC13.79□□□□□ -0.2
VRK2Q86Y07 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AL033527.5-201ENST00000641382 801 ntBASIC13.79□□□□□ -0.2
VRK2Q86Y07 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 AL136172.1-201ENST00000598590 1394 ntBASIC13.79□□□□□ -0.2
VRK2Q86Y07 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK2Q86Y07 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK2Q86Y07 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.78□□□□□ -0.2
VRK2Q86Y07 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms