Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 AC092552.1-201ENST00000547243 906 ntBASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 CTBP2P3-201ENST00000585629 1255 ntBASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 AC105250.1-201ENST00000509378 2057 ntBASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 CU639417.3-201ENST00000624240 1404 ntBASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPRIN2Q6IMN6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 WASH4P-201ENST00000564273 1246 ntBASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AC112693.3-201ENST00000624819 1983 ntBASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPRIN2Q6IMN6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPRIN2Q6IMN6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms