Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL3Q6DD88 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 POM121L8P-201ENST00000417732 1281 ntBASIC16.96■□□□□ 0.31
ATL3Q6DD88 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 POM121L9P-203ENST00000441984 1285 ntBASIC16.96■□□□□ 0.31
ATL3Q6DD88 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 AL132655.2-201ENST00000596276 594 ntBASIC16.96■□□□□ 0.31
ATL3Q6DD88 CHCHD2P3-201ENST00000603038 451 ntBASIC16.96■□□□□ 0.31
ATL3Q6DD88 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 AC007541.1-201ENST00000570282 1469 ntBASIC16.96■□□□□ 0.31
ATL3Q6DD88 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATL3Q6DD88 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATL3Q6DD88 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.96■□□□□ 0.3
ATL3Q6DD88 AC011498.7-201ENST00000624986 2027 ntBASIC16.96■□□□□ 0.3
ATL3Q6DD88 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATL3Q6DD88 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.96■□□□□ 0.3
ATL3Q6DD88 AC015818.8-201ENST00000587907 1519 ntBASIC16.96■□□□□ 0.3
ATL3Q6DD88 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ATL3Q6DD88 CLUHP2-201ENST00000426660 1303 ntBASIC16.96■□□□□ 0.3
ATL3Q6DD88 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 ELK1P1-201ENST00000485699 580 ntBASIC16.95■□□□□ 0.3
ATL3Q6DD88 RN7SL48P-201ENST00000579283 293 ntBASIC16.95■□□□□ 0.3
ATL3Q6DD88 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 AC138466.3-201ENST00000619983 221 ntBASIC16.95■□□□□ 0.3
ATL3Q6DD88 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATL3Q6DD88 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ATL3Q6DD88 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC104581.4-201ENST00000623126 3052 ntBASIC16.94■□□□□ 0.3
ATL3Q6DD88 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 FTLP10-202ENST00000505798 471 ntBASIC16.94■□□□□ 0.3
ATL3Q6DD88 SERBP1P5-201ENST00000510079 1181 ntBASIC16.94■□□□□ 0.3
ATL3Q6DD88 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL3Q6DD88 CU634019.7-201ENST00000624153 1185 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms