Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AL133267.1-201ENST00000398220 340 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC004461.1-201ENST00000412461 403 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 HIST3H2BA-201ENST00000436555 524 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 TPT1P11-201ENST00000458482 498 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AC004835.2-201ENST00000603762 682 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC130686.1-201ENST00000622936 2466 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 MIR193BHG-211ENST00000641433 5365 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC211486.1-202ENST00000416371 468 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AL627223.1-201ENST00000416693 442 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC211476.1-201ENST00000503899 468 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AP000344.2-201ENST00000512987 629 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ALG1L8P-201ENST00000533887 760 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AC025181.2-201ENST00000606994 802 ntBASIC11.91□□□□□ -0.5
FAM78BQ5VT40 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.91□□□□□ -0.5
FAM78BQ5VT40 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms