Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 MIR339-201ENST00000362153 94 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 THAP4-203ENST00000402545 833 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 PSME2P2-201ENST00000453033 700 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 HNRNPA1P56-201ENST00000505767 954 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 Z82244.2-201ENST00000632196 448 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 MROH4P-201ENST00000431302 1578 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 CYP2T1P-202ENST00000641596 2535 ntBASIC19.24■□□□□ 0.67
COL16A1Q07092 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 KRT18P33-201ENST00000398525 1043 ntBASIC19.24■□□□□ 0.67
COL16A1Q07092 FTH1P18-201ENST00000412071 549 ntBASIC19.24■□□□□ 0.67
COL16A1Q07092 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC19.24■□□□□ 0.67
COL16A1Q07092 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.24■□□□□ 0.67
COL16A1Q07092 GRAMD4P6-201ENST00000556999 244 ntBASIC19.24■□□□□ 0.67
COL16A1Q07092 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.24■□□□□ 0.67
COL16A1Q07092 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.24■□□□□ 0.67
COL16A1Q07092 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 PRR20FP-201ENST00000603320 180 ntBASIC19.24■□□□□ 0.67
COL16A1Q07092 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC19.24■□□□□ 0.67
COL16A1Q07092 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.24■□□□□ 0.67
COL16A1Q07092 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL16A1Q07092 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL16A1Q07092 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL16A1Q07092 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.23■□□□□ 0.67
COL16A1Q07092 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
COL16A1Q07092 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC19.23■□□□□ 0.67
COL16A1Q07092 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC19.23■□□□□ 0.67
COL16A1Q07092 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19.23■□□□□ 0.67
COL16A1Q07092 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC19.23■□□□□ 0.67
COL16A1Q07092 ACTBP9-201ENST00000587663 1099 ntBASIC19.23■□□□□ 0.67
COL16A1Q07092 KF455155.1-201ENST00000604493 303 ntBASIC19.23■□□□□ 0.67
COL16A1Q07092 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 RPL4P6-201ENST00000438116 1304 ntBASIC19.23■□□□□ 0.67
COL16A1Q07092 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
COL16A1Q07092 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.23■□□□□ 0.67
COL16A1Q07092 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.23■□□□□ 0.67
COL16A1Q07092 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
COL16A1Q07092 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL16A1Q07092 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COL16A1Q07092 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms