Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.86■□□□□ 0.93
CLTCQ00610 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CLTCQ00610 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 OR7E115P-201ENST00000382617 1024 ntBASIC20.86■□□□□ 0.93
CLTCQ00610 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.86■□□□□ 0.93
CLTCQ00610 AC092573.1-201ENST00000433054 884 ntBASIC20.86■□□□□ 0.93
CLTCQ00610 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.86■□□□□ 0.93
CLTCQ00610 PRSS3P1-201ENST00000503996 742 ntBASIC20.86■□□□□ 0.93
CLTCQ00610 BCL2L12P1-201ENST00000508390 733 ntBASIC20.86■□□□□ 0.93
CLTCQ00610 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTCQ00610 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLTCQ00610 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLTCQ00610 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
CLTCQ00610 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CLTCQ00610 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLTCQ00610 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLTCQ00610 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLTCQ00610 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLTCQ00610 AL161932.2-201ENST00000435436 679 ntBASIC20.85■□□□□ 0.93
CLTCQ00610 RN7SL128P-201ENST00000467883 305 ntBASIC20.85■□□□□ 0.93
CLTCQ00610 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.85■□□□□ 0.93
CLTCQ00610 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.85■□□□□ 0.93
CLTCQ00610 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.85■□□□□ 0.93
CLTCQ00610 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC20.85■□□□□ 0.93
CLTCQ00610 AC110057.1-201ENST00000636031 898 ntBASIC20.85■□□□□ 0.93
CLTCQ00610 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.85■□□□□ 0.93
CLTCQ00610 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLTCQ00610 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLTCQ00610 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLTCQ00610 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLTCQ00610 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLTCQ00610 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC20.84■□□□□ 0.93
CLTCQ00610 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.84■□□□□ 0.93
CLTCQ00610 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.84■□□□□ 0.93
CLTCQ00610 ASS1P2-201ENST00000439895 1223 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 BCRP4-201ENST00000506079 804 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.84■□□□□ 0.93
CLTCQ00610 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.84■□□□□ 0.93
CLTCQ00610 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.84■□□□□ 0.93
CLTCQ00610 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CLTCQ00610 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.84■□□□□ 0.93
CLTCQ00610 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 TMBIM7P-203ENST00000641617 1718 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLTCQ00610 WASH7P-201ENST00000488147 1351 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.84■□□□□ 0.93
CLTCQ00610 ACE3P-201ENST00000423435 1973 ntBASIC20.84■□□□□ 0.93
CLTCQ00610 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC20.83■□□□□ 0.93
CLTCQ00610 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CLTCQ00610 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.83■□□□□ 0.93
CLTCQ00610 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC20.83■□□□□ 0.93
CLTCQ00610 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
CLTCQ00610 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC20.83■□□□□ 0.93
CLTCQ00610 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.83■□□□□ 0.93
CLTCQ00610 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 CES1P2-201ENST00000566467 1242 ntBASIC20.83■□□□□ 0.93
CLTCQ00610 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.83■□□□□ 0.93
CLTCQ00610 PRMT1P1-201ENST00000604252 1009 ntBASIC20.83■□□□□ 0.93
CLTCQ00610 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.83■□□□□ 0.93
CLTCQ00610 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CLTCQ00610 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLTCQ00610 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CLTCQ00610 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.83■□□□□ 0.92
CLTCQ00610 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 AP000244.1-201ENST00000424582 201 ntBASIC20.83■□□□□ 0.92
CLTCQ00610 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.83■□□□□ 0.92
CLTCQ00610 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLTCQ00610 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC20.83■□□□□ 0.92
CLTCQ00610 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms