Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.58□□□□□ -0.08
CDK3Q00526 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.58□□□□□ -0.08
CDK3Q00526 BX284668.4-201ENST00000453917 508 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 AKR7A2P1-201ENST00000460134 915 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 AC138649.2-201ENST00000615886 705 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.58□□□□□ -0.08
CDK3Q00526 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 AL590440.2-201ENST00000641973 1595 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 AL008718.2-201ENST00000609206 1313 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 PCDHA3-202ENST00000532566 4594 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDK3Q00526 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDK3Q00526 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDK3Q00526 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDK3Q00526 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.57□□□□□ -0.08
CDK3Q00526 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.57□□□□□ -0.08
CDK3Q00526 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.57□□□□□ -0.08
CDK3Q00526 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.57□□□□□ -0.08
CDK3Q00526 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.57□□□□□ -0.08
CDK3Q00526 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 AC009884.2-201ENST00000603110 324 ntBASIC14.57□□□□□ -0.08
CDK3Q00526 Z98259.2-201ENST00000641583 609 ntBASIC14.57□□□□□ -0.08
CDK3Q00526 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.57□□□□□ -0.08
CDK3Q00526 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.57□□□□□ -0.08
CDK3Q00526 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDK3Q00526 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDK3Q00526 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms