Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 AC023908.3-201ENST00000564211 3047 ntBASIC14.3□□□□□ -0.12
VSX2P58304 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 AC139749.1-202ENST00000617529 3139 ntBASIC14.3□□□□□ -0.12
VSX2P58304 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 AL355994.2-201ENST00000447882 704 ntBASIC14.29□□□□□ -0.12
VSX2P58304 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.29□□□□□ -0.12
VSX2P58304 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.29□□□□□ -0.12
VSX2P58304 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.29□□□□□ -0.12
VSX2P58304 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.29□□□□□ -0.12
VSX2P58304 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.29□□□□□ -0.12
VSX2P58304 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.29□□□□□ -0.12
VSX2P58304 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.29□□□□□ -0.12
VSX2P58304 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 TUBB1P2-201ENST00000422712 1306 ntBASIC14.29□□□□□ -0.12
VSX2P58304 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 TUBB1P1-201ENST00000503144 1300 ntBASIC14.29□□□□□ -0.12
VSX2P58304 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 AC026748.1-201ENST00000624349 3251 ntBASIC14.29□□□□□ -0.12
VSX2P58304 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
VSX2P58304 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VSX2P58304 AJ011931.1-201ENST00000618749 2492 ntBASIC14.29□□□□□ -0.12
VSX2P58304 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VSX2P58304 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms