Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RIPK4P57078 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.39■□□□□ 0.69
RIPK4P57078 AL022328.3-201ENST00000607943 679 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK4P57078 AL590440.2-201ENST00000641973 1595 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RIPK4P57078 AC007686.3-201ENST00000619017 3487 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK4P57078 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 AC139712.1-201ENST00000378256 1875 ntBASIC19.39■□□□□ 0.69
RIPK4P57078 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK4P57078 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
RIPK4P57078 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.38■□□□□ 0.69
RIPK4P57078 AC021723.1-201ENST00000486306 515 ntBASIC19.38■□□□□ 0.69
RIPK4P57078 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 AC015688.4-201ENST00000580780 1647 ntBASIC19.38■□□□□ 0.69
RIPK4P57078 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 AC243960.2-201ENST00000600996 747 ntBASIC19.38■□□□□ 0.69
RIPK4P57078 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.38■□□□□ 0.69
RIPK4P57078 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 AC022748.3-201ENST00000621828 275 ntBASIC19.38■□□□□ 0.69
RIPK4P57078 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RIPK4P57078 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK4P57078 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK4P57078 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 KRT8P29-201ENST00000420409 1371 ntBASIC19.37■□□□□ 0.69
RIPK4P57078 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RIPK4P57078 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.37■□□□□ 0.69
RIPK4P57078 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.37■□□□□ 0.69
RIPK4P57078 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RIPK4P57078 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RIPK4P57078 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms