Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 AC190387.1-201ENST00000551683 408 ntBASIC14.15□□□□□ -0.14
CASP9P55211 AL359711.2-201ENST00000563105 872 ntBASIC14.15□□□□□ -0.14
CASP9P55211 AC120045.2-201ENST00000567334 178 ntBASIC14.15□□□□□ -0.14
CASP9P55211 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 BRI3BPP1-201ENST00000594224 787 ntBASIC14.15□□□□□ -0.14
CASP9P55211 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.15□□□□□ -0.14
CASP9P55211 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 AJ011932.1-201ENST00000621707 465 ntBASIC14.15□□□□□ -0.14
CASP9P55211 BX539320.1-201ENST00000623759 877 ntBASIC14.15□□□□□ -0.14
CASP9P55211 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 AL354702.1-201ENST00000442006 1960 ntBASIC14.14□□□□□ -0.15
CASP9P55211 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CASP9P55211 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.14□□□□□ -0.15
CASP9P55211 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 SLC7A15P-201ENST00000424028 1363 ntBASIC14.14□□□□□ -0.15
CASP9P55211 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 C1QBPP1-201ENST00000400117 770 ntBASIC14.14□□□□□ -0.15
CASP9P55211 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.14□□□□□ -0.15
CASP9P55211 SERBP1P5-201ENST00000510079 1181 ntBASIC14.14□□□□□ -0.15
CASP9P55211 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.14□□□□□ -0.15
CASP9P55211 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.14□□□□□ -0.15
CASP9P55211 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.14□□□□□ -0.15
CASP9P55211 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CASP9P55211 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CASP9P55211 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CASP9P55211 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CASP9P55211 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms