Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HADHBP55084 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HADHBP55084 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 BAATP1-201ENST00000412284 1225 ntBASIC15.51■□□□□ 0.07
HADHBP55084 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHBP55084 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HADHBP55084 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHBP55084 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 AC008494.3-201ENST00000606615 944 ntBASIC15.51■□□□□ 0.07
HADHBP55084 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 OR2I1P-210ENST00000642037 4691 ntBASIC15.51■□□□□ 0.07
HADHBP55084 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHBP55084 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHBP55084 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HADHBP55084 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
HADHBP55084 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HADHBP55084 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHBP55084 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
HADHBP55084 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.5■□□□□ 0.07
HADHBP55084 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHBP55084 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHBP55084 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HADHBP55084 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 AC140912.1-201ENST00000577171 1054 ntBASIC15.5■□□□□ 0.07
HADHBP55084 AC104506.1-201ENST00000609247 429 ntBASIC15.5■□□□□ 0.07
HADHBP55084 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHBP55084 AL033527.5-201ENST00000641382 801 ntBASIC15.5■□□□□ 0.07
HADHBP55084 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHBP55084 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHBP55084 KRT8P28-201ENST00000433288 1390 ntBASIC15.49■□□□□ 0.07
HADHBP55084 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HADHBP55084 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HADHBP55084 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HADHBP55084 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HADHBP55084 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHBP55084 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHBP55084 AC130686.1-201ENST00000622936 2466 ntBASIC15.49■□□□□ 0.07
HADHBP55084 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHBP55084 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHBP55084 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHBP55084 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.49■□□□□ 0.07
HADHBP55084 AC011495.1-201ENST00000498085 584 ntBASIC15.49■□□□□ 0.07
HADHBP55084 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHBP55084 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHBP55084 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.49■□□□□ 0.07
HADHBP55084 AC027237.1-201ENST00000560942 655 ntBASIC15.49■□□□□ 0.07
HADHBP55084 AC106820.3-201ENST00000561653 397 ntBASIC15.49■□□□□ 0.07
HADHBP55084 WASH4P-201ENST00000564273 1246 ntBASIC15.49■□□□□ 0.07
HADHBP55084 LINC02560-201ENST00000596379 459 ntBASIC15.49■□□□□ 0.07
HADHBP55084 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms