Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP98P52948 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NUP98P52948 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP98P52948 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 AC215219.1-201ENST00000400706 1817 ntBASIC18.04■□□□□ 0.48
NUP98P52948 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NUP98P52948 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP98P52948 AC005740.1-201ENST00000515639 522 ntBASIC18.04■□□□□ 0.48
NUP98P52948 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NUP98P52948 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 AP000322.3-201ENST00000608665 388 ntBASIC18.04■□□□□ 0.48
NUP98P52948 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 HYMAI-201ENST00000635591 3347 ntBASIC18.04■□□□□ 0.48
NUP98P52948 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP98P52948 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.04■□□□□ 0.48
NUP98P52948 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP98P52948 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NUP98P52948 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.03■□□□□ 0.48
NUP98P52948 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 AC006987.1-201ENST00000413610 527 ntBASIC18.03■□□□□ 0.48
NUP98P52948 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.03■□□□□ 0.48
NUP98P52948 RPL18AP8-201ENST00000486071 528 ntBASIC18.03■□□□□ 0.48
NUP98P52948 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.03■□□□□ 0.48
NUP98P52948 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.03■□□□□ 0.48
NUP98P52948 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 AC092384.3-202ENST00000564646 2873 ntBASIC18.03■□□□□ 0.48
NUP98P52948 HTR7P1-202ENST00000624664 4411 ntBASIC18.03■□□□□ 0.48
NUP98P52948 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP98P52948 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.03■□□□□ 0.48
NUP98P52948 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NUP98P52948 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NUP98P52948 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.02■□□□□ 0.48
NUP98P52948 NDUFB10P1-201ENST00000567319 521 ntBASIC18.02■□□□□ 0.48
NUP98P52948 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.02■□□□□ 0.48
NUP98P52948 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NUP98P52948 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NUP98P52948 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NUP98P52948 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.02■□□□□ 0.47
NUP98P52948 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.02■□□□□ 0.47
NUP98P52948 RN7SL470P-201ENST00000583069 259 ntBASIC18.02■□□□□ 0.47
NUP98P52948 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.02■□□□□ 0.47
NUP98P52948 AC104506.1-201ENST00000609247 429 ntBASIC18.02■□□□□ 0.47
NUP98P52948 MIR6074-201ENST00000612054 107 ntBASIC18.02■□□□□ 0.47
NUP98P52948 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NUP98P52948 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.01■□□□□ 0.47
NUP98P52948 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms