Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 AC022144.1-201ENST00000602255 1580 ntBASIC13.57□□□□□ -0.24
HMGA2P52926 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 FAM90A12P-201ENST00000519497 2375 ntBASIC13.57□□□□□ -0.24
HMGA2P52926 FAM90A24P-201ENST00000520792 2369 ntBASIC13.57□□□□□ -0.24
HMGA2P52926 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
HMGA2P52926 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HMGA2P52926 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 RN7SKP230-201ENST00000365642 335 ntBASIC13.56□□□□□ -0.24
HMGA2P52926 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
HMGA2P52926 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HMGA2P52926 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.56□□□□□ -0.24
HMGA2P52926 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.56□□□□□ -0.24
HMGA2P52926 TPRX2P-201ENST00000535362 881 ntBASIC13.56□□□□□ -0.24
HMGA2P52926 AC004790.1-201ENST00000612686 536 ntBASIC13.56□□□□□ -0.24
HMGA2P52926 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 AP005019.2-201ENST00000615104 511 ntBASIC13.56□□□□□ -0.24
HMGA2P52926 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HMGA2P52926 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HMGA2P52926 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGA2P52926 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGA2P52926 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HMGA2P52926 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 AC111170.3-201ENST00000624282 2464 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HMGA2P52926 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HMGA2P52926 AL591122.2-201ENST00000624125 1853 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.55□□□□□ -0.24
HMGA2P52926 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 MIR943-201ENST00000401286 94 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 ACTBP8-201ENST00000403258 1108 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 AL442647.2-201ENST00000429864 857 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 DOC2GP-202ENST00000514950 1163 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGA2P52926 AP001582.1-201ENST00000525856 295 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
HMGA2P52926 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 AL390955.2-201ENST00000603032 514 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGA2P52926 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms