Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.34■□□□□ 0.21
USP8P40818 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 FAM207CP-201ENST00000443486 507 ntBASIC16.34■□□□□ 0.21
USP8P40818 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 AC092552.1-201ENST00000547243 906 ntBASIC16.34■□□□□ 0.21
USP8P40818 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 AL391825.1-201ENST00000457671 1364 ntBASIC16.34■□□□□ 0.21
USP8P40818 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
USP8P40818 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP8P40818 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
USP8P40818 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP8P40818 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP8P40818 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP8P40818 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
USP8P40818 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
USP8P40818 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.33■□□□□ 0.21
USP8P40818 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP8P40818 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 SOCS2P1-201ENST00000417727 557 ntBASIC16.33■□□□□ 0.2
USP8P40818 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.33■□□□□ 0.2
USP8P40818 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.33■□□□□ 0.2
USP8P40818 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.33■□□□□ 0.2
USP8P40818 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.33■□□□□ 0.2
USP8P40818 AC008494.3-201ENST00000606615 944 ntBASIC16.33■□□□□ 0.2
USP8P40818 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.33■□□□□ 0.2
USP8P40818 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP8P40818 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
USP8P40818 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
USP8P40818 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
USP8P40818 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP8P40818 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
USP8P40818 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.32■□□□□ 0.2
USP8P40818 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 AL442647.2-201ENST00000429864 857 ntBASIC16.32■□□□□ 0.2
USP8P40818 HLA-K-203ENST00000430151 1046 ntBASIC16.32■□□□□ 0.2
USP8P40818 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.32■□□□□ 0.2
USP8P40818 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms