Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.43■□□□□ 0.54
RFC4P35249 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.43■□□□□ 0.54
RFC4P35249 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.43■□□□□ 0.54
RFC4P35249 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.43■□□□□ 0.54
RFC4P35249 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 MROH4P-201ENST00000431302 1578 ntBASIC18.42■□□□□ 0.54
RFC4P35249 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 AL590440.2-201ENST00000641973 1595 ntBASIC18.42■□□□□ 0.54
RFC4P35249 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC4P35249 GCSHP3-201ENST00000431120 391 ntBASIC18.42■□□□□ 0.54
RFC4P35249 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC4P35249 RN7SL396P-201ENST00000471086 295 ntBASIC18.42■□□□□ 0.54
RFC4P35249 RN7SL277P-201ENST00000481521 288 ntBASIC18.42■□□□□ 0.54
RFC4P35249 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.42■□□□□ 0.54
RFC4P35249 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC4P35249 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.42■□□□□ 0.54
RFC4P35249 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC4P35249 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.42■□□□□ 0.54
RFC4P35249 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.42■□□□□ 0.54
RFC4P35249 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
RFC4P35249 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.42■□□□□ 0.54
RFC4P35249 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFC4P35249 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 RN7SKP109-201ENST00000410592 316 ntBASIC18.41■□□□□ 0.54
RFC4P35249 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.41■□□□□ 0.54
RFC4P35249 ERP29P1-201ENST00000442902 706 ntBASIC18.41■□□□□ 0.54
RFC4P35249 RPL18AP8-201ENST00000486071 528 ntBASIC18.41■□□□□ 0.54
RFC4P35249 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.41■□□□□ 0.54
RFC4P35249 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 AL451007.2-201ENST00000632004 563 ntBASIC18.41■□□□□ 0.54
RFC4P35249 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 AC020658.6-201ENST00000623564 1870 ntBASIC18.41■□□□□ 0.54
RFC4P35249 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.41■□□□□ 0.54
RFC4P35249 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 WASH3P-207ENST00000560956 1394 ntBASIC18.41■□□□□ 0.54
RFC4P35249 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC4P35249 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.41■□□□□ 0.54
RFC4P35249 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.4■□□□□ 0.54
RFC4P35249 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RFC4P35249 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC4P35249 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC4P35249 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms