Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS2P33552 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS2P33552 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS2P33552 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11□□□□□ -0.65
CKS2P33552 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11□□□□□ -0.65
CKS2P33552 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CKS2P33552 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS2P33552 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
CKS2P33552 FO393414.2-201ENST00000405153 598 ntBASIC11□□□□□ -0.65
CKS2P33552 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 KRT18P67-201ENST00000432816 1264 ntBASIC11□□□□□ -0.65
CKS2P33552 AC009947.1-201ENST00000444350 727 ntBASIC11□□□□□ -0.65
CKS2P33552 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11□□□□□ -0.65
CKS2P33552 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 KRT18P21-201ENST00000515767 1272 ntBASIC11□□□□□ -0.65
CKS2P33552 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11□□□□□ -0.65
CKS2P33552 KRT19P2-202ENST00000557173 1012 ntBASIC11□□□□□ -0.65
CKS2P33552 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11□□□□□ -0.65
CKS2P33552 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11□□□□□ -0.65
CKS2P33552 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 FAM90A12P-201ENST00000519497 2375 ntBASIC11□□□□□ -0.65
CKS2P33552 FAM90A24P-201ENST00000520792 2369 ntBASIC11□□□□□ -0.65
CKS2P33552 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11□□□□□ -0.65
CKS2P33552 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11□□□□□ -0.65
CKS2P33552 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
CKS2P33552 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
CKS2P33552 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
CKS2P33552 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS2P33552 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CKS2P33552 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms