Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXA6P31267 AC009145.4-201ENST00000625119 1294 ntBASIC14.44□□□□□ -0.1
HOXA6P31267 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXA6P31267 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXA6P31267 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXA6P31267 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HOXA6P31267 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 CTBP2P8-201ENST00000422584 1330 ntBASIC14.43□□□□□ -0.1
HOXA6P31267 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXA6P31267 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXA6P31267 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 AC092580.1-201ENST00000433998 658 ntBASIC14.43□□□□□ -0.1
HOXA6P31267 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXA6P31267 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXA6P31267 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXA6P31267 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 AC018695.6-201ENST00000614011 534 ntBASIC14.43□□□□□ -0.1
HOXA6P31267 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXA6P31267 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
HOXA6P31267 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXA6P31267 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 COX20P1-201ENST00000366529 357 ntBASIC14.42□□□□□ -0.1
HOXA6P31267 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXA6P31267 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 ACTG1P19-201ENST00000418987 1116 ntBASIC14.42□□□□□ -0.1
HOXA6P31267 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXA6P31267 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXA6P31267 RN7SL494P-201ENST00000461517 304 ntBASIC14.42□□□□□ -0.1
HOXA6P31267 FAM86KP-201ENST00000509817 987 ntBASIC14.42□□□□□ -0.1
HOXA6P31267 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.42□□□□□ -0.1
HOXA6P31267 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms