Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.72□□□□□ -0.21
SHC1P29353 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.72□□□□□ -0.21
SHC1P29353 AC015936.2-201ENST00000593177 259 ntBASIC13.72□□□□□ -0.21
SHC1P29353 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.72□□□□□ -0.21
SHC1P29353 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 KRT8P14-201ENST00000414254 1442 ntBASIC13.72□□□□□ -0.21
SHC1P29353 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 AC018665.1-201ENST00000622927 1362 ntBASIC13.71□□□□□ -0.21
SHC1P29353 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 AC007326.2-201ENST00000624224 7579 ntBASIC13.71□□□□□ -0.21
SHC1P29353 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.71□□□□□ -0.21
SHC1P29353 NUS1P3-201ENST00000423502 862 ntBASIC13.71□□□□□ -0.21
SHC1P29353 EIF3FP3-201ENST00000434851 1086 ntBASIC13.71□□□□□ -0.21
SHC1P29353 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 CROCCP4-201ENST00000457096 498 ntBASIC13.71□□□□□ -0.21
SHC1P29353 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.71□□□□□ -0.21
SHC1P29353 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.71□□□□□ -0.21
SHC1P29353 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.71□□□□□ -0.21
SHC1P29353 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.71□□□□□ -0.21
SHC1P29353 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SHC1P29353 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHC1P29353 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.71□□□□□ -0.21
SHC1P29353 AL137783.1-201ENST00000623494 1896 ntBASIC13.71□□□□□ -0.21
SHC1P29353 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.71□□□□□ -0.21
SHC1P29353 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHC1P29353 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SHC1P29353 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SHC1P29353 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.71□□□□□ -0.22
SHC1P29353 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SHC1P29353 LILRP1-201ENST00000444199 1370 ntBASIC13.71□□□□□ -0.22
SHC1P29353 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
SHC1P29353 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHC1P29353 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 AC063926.2-201ENST00000623766 1308 ntBASIC13.7□□□□□ -0.22
SHC1P29353 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.7□□□□□ -0.22
SHC1P29353 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.7□□□□□ -0.22
SHC1P29353 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 ACTBP8-201ENST00000403258 1108 ntBASIC13.7□□□□□ -0.22
SHC1P29353 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.7□□□□□ -0.22
SHC1P29353 AC114812.1-204ENST00000449669 728 ntBASIC13.7□□□□□ -0.22
SHC1P29353 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.7□□□□□ -0.22
SHC1P29353 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 GNRHR2-203ENST00000581100 1187 ntBASIC13.7□□□□□ -0.22
SHC1P29353 BTNL10-201ENST00000595971 695 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms