Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 AL158070.2-201ENST00000623713 1621 ntBASIC14.75□□□□□ -0.05
VARSP26640 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VARSP26640 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 C1QBPP1-201ENST00000400117 770 ntBASIC14.75□□□□□ -0.05
VARSP26640 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 RN7SL837P-201ENST00000463010 287 ntBASIC14.75□□□□□ -0.05
VARSP26640 ELK1P1-201ENST00000485699 580 ntBASIC14.75□□□□□ -0.05
VARSP26640 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.75□□□□□ -0.05
VARSP26640 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VARSP26640 AC124283.3-201ENST00000570869 594 ntBASIC14.75□□□□□ -0.05
VARSP26640 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.75□□□□□ -0.05
VARSP26640 CTBP2P3-201ENST00000585629 1255 ntBASIC14.75□□□□□ -0.05
VARSP26640 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.75□□□□□ -0.05
VARSP26640 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.75□□□□□ -0.05
VARSP26640 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VARSP26640 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 LINC01230-201ENST00000625222 3017 ntBASIC14.74□□□□□ -0.05
VARSP26640 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 AL360270.3-201ENST00000609118 1348 ntBASIC14.74□□□□□ -0.05
VARSP26640 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 INTS4P1-203ENST00000641008 3683 ntBASIC14.74□□□□□ -0.05
VARSP26640 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.74□□□□□ -0.05
VARSP26640 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 AL691447.1-201ENST00000419456 387 ntBASIC14.74□□□□□ -0.05
VARSP26640 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.74□□□□□ -0.05
VARSP26640 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.74□□□□□ -0.05
VARSP26640 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.74□□□□□ -0.05
VARSP26640 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.74□□□□□ -0.05
VARSP26640 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VARSP26640 TMEM261P1-201ENST00000604899 340 ntBASIC14.74□□□□□ -0.05
VARSP26640 AC093813.1-201ENST00000605066 256 ntBASIC14.74□□□□□ -0.05
VARSP26640 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 AC103798.2-201ENST00000624292 632 ntBASIC14.74□□□□□ -0.05
VARSP26640 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.74□□□□□ -0.05
VARSP26640 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VARSP26640 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms