Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PTPN3P26045 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN3P26045 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 AL035633.1-201ENST00000406139 838 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 FAM197Y7-201ENST00000432892 766 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 C2orf27AP3-201ENST00000434123 579 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 RNA5SP486-201ENST00000515961 83 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 AP003171.2-201ENST00000528208 925 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN3P26045 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 AL354718.3-201ENST00000616414 581 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 CR382287.1-201ENST00000623954 586 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 AC105233.6-201ENST00000642093 218 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN3P26045 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
PTPN3P26045 AC027601.5-201ENST00000624065 2482 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 HSPA7-201ENST00000445535 1927 ntBASIC15.16■□□□□ 0.02
PTPN3P26045 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTPN3P26045 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN3P26045 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 RN7SKP175-201ENST00000408472 289 ntBASIC15.16■□□□□ 0.02
PTPN3P26045 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN3P26045 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 AC117489.1-201ENST00000625169 3217 ntBASIC15.16■□□□□ 0.02
PTPN3P26045 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PTPN3P26045 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN3P26045 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN3P26045 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN3P26045 OR2I1P-210ENST00000642037 4691 ntBASIC15.16■□□□□ 0.02
PTPN3P26045 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN3P26045 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN3P26045 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN3P26045 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN3P26045 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PTPN3P26045 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PTPN3P26045 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 AC016694.1-201ENST00000434179 700 ntBASIC15.15■□□□□ 0.02
PTPN3P26045 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN3P26045 MYADML-201ENST00000474610 2147 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms