Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 OR8S1-201ENST00000310194 1080 ntBASIC13.99□□□□□ -0.17
CHMP24386 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
CHMP24386 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 ACTG1P3-201ENST00000431775 1114 ntBASIC13.99□□□□□ -0.17
CHMP24386 TTTY23B-201ENST00000442790 549 ntBASIC13.99□□□□□ -0.17
CHMP24386 GPR53P-205ENST00000457298 1084 ntBASIC13.99□□□□□ -0.17
CHMP24386 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.99□□□□□ -0.17
CHMP24386 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.99□□□□□ -0.17
CHMP24386 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
CHMP24386 AC025181.2-201ENST00000606994 802 ntBASIC13.99□□□□□ -0.17
CHMP24386 AC107373.2-201ENST00000607735 490 ntBASIC13.99□□□□□ -0.17
CHMP24386 AL162274.1-201ENST00000617191 1098 ntBASIC13.99□□□□□ -0.17
CHMP24386 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.99□□□□□ -0.17
CHMP24386 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.99□□□□□ -0.17
CHMP24386 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHMP24386 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHMP24386 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CHMP24386 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CHMP24386 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.98□□□□□ -0.17
CHMP24386 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.98□□□□□ -0.17
CHMP24386 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.98□□□□□ -0.17
CHMP24386 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.98□□□□□ -0.17
CHMP24386 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.98□□□□□ -0.17
CHMP24386 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CHMP24386 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.98□□□□□ -0.17
CHMP24386 AC010319.3-201ENST00000597028 470 ntBASIC13.98□□□□□ -0.17
CHMP24386 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.98□□□□□ -0.17
CHMP24386 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CHMP24386 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.98□□□□□ -0.17
CHMP24386 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.98□□□□□ -0.17
CHMP24386 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHMP24386 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms