Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.7□□□□□ -0.06
CDH3P22223 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDH3P22223 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH3P22223 KRT90P-201ENST00000549264 1064 ntBASIC14.7□□□□□ -0.06
CDH3P22223 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CDH3P22223 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 RHOXF1P1-202ENST00000635473 501 ntBASIC14.7□□□□□ -0.06
CDH3P22223 PRSS30P-206ENST00000641773 873 ntBASIC14.7□□□□□ -0.06
CDH3P22223 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH3P22223 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH3P22223 AC006504.5-208ENST00000588784 2401 ntBASIC14.7□□□□□ -0.06
CDH3P22223 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH3P22223 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH3P22223 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.69□□□□□ -0.06
CDH3P22223 AP000812.2-201ENST00000538934 718 ntBASIC14.69□□□□□ -0.06
CDH3P22223 AC079316.1-201ENST00000548397 411 ntBASIC14.69□□□□□ -0.06
CDH3P22223 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH3P22223 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH3P22223 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDH3P22223 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH3P22223 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH3P22223 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH3P22223 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms